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Epidemiology & Biostatistics:
- Behavioral and biological assessment of HIV high-risk population in six HIV high prevalence states and five segments of national highways
- Phase I Randomized, Placebo-Controlled, Double-Blind Dose-Escalation Trial to Evaluate the Safety and Immunogenicity of tgAAC09, a gag-PR-DRT AAV HIV Vaccine
- Phase II Expanded Safety and Acceptability Study of the Vaginal Microbicide 1% Tenofovir Gel [HPTN 059]
- Reddy Female Condom: Evaluation of Three Condom Shaft Lengths
- Assessing the Vascular Changes occurring in the Cervix in relation to the Hormonal levels and Menstrual Cycle
- Randomized Trial to Evaluate the Effectiveness of Antiretroviral Therapy plus HIV Primary Care versus HIV Primary Care Alone to Prevent the Sexual Transmission of HIV-1 in Sero-discordant Couples (HPTN 052 Study)
- Annual Sentinel Surveillance for HIV infection

Clinical Science:
- Phase IV, prospective, Randomized, Open Label Evaluation of The Efficacy of Once Daily Protease Inhibitor and Once-Daily Non-Nucleoside Reverse Transcriptase Inhibitor-Containing Therapy Combinations for Initial Treatment of HIV-1 Infected Individuals
- Chemotherapy of tuberculosis in HIV infected patients: an evaluation of intermittent short course (RNTCP) regimens
- National AIDS Control Organization Programme - NARI ART Link Center
- Feasibility Study on Dementia - structured neurocognitive and neurological assessment of HIV infected individuals
- Screening for Peripheral Neuropathy and Dementia in an HIV infected population using International HIV Dementia Scoring (IHDS)
- Clinical Progression of HIV-infected Individuals

Virology and Molecular virology:
- Genotypic & phenotypic characterization of HIV isolation
- Anti-Retroviral Testing through genotypic characterization
- Studies on Mother to Infant (MIT) Transmission
- Studies on virus constructs expressing env, gag, pol, nef, tat and rev genes of HIV-I in modified Vaccinia Ankara
Subtyping of HIV-1 and detection of recombinants in India by high throughput screening
- HIV-2 envelope gene cloning and sequencing from Indian patients
- 32 Mutation in CCR5 Coreceptor in Long term Non-Progressors and Exposed but Uninfected individuals
- Neutralization epitope mapping in HIV-1 Envelope protein and characterization of escape mutants
- Genetic Diversity and Molecular Characterization of HIV-1
- Cellular Tropism of HIV-1 of Indian Clades in primary cell types and their sensitivities to novel inhibitors, chemokine antagonists and antibodies
- Factors regulating slow and rapid progression of AIDS
- Host and viral factors regulating transmission and pathogenesis of HIV-1 in HIV-associated neuropathogenesis and HIV-associated pulmonary tuberculosis
- Trafficking of HIV-1 viral proteins, budding and assembly in primary cell types
- Host and viral factors regulating transmission and pathogenesis of HIV-1 in HIV-associated neuropathogenesis and HIV-associated pulmonary tuberculosis
- Testing of indigenous products to screen anti-HIV activities towards development of microbicides

Immunology and Serology
Immunology:
- Development of a candidate vaccine basedon multiple CTL epitopes for gag and env antigens from Indian HIV-1subtype C viruses
- Immunological and virological characterization of early HIV infection
- External quality assurance programme for NACO centers estimating CD4 count estimation in ART roll out programme
- Interaction of dendritic cells and HIV
- Characterization of HIV-specific Cytotoxic T Lymphocyte response
Serology:
- Tests for HIV antibodies in the blood samples obtained from the patients who attended any of the nine clinics of the institute
- Confirmation of HIV diagnosis of samples received from various organizations in and around Pune and other parts of Maharashtra state
- Testing samples of foreign students admitted to Pune University
- Testing of blood products for anti-HIV antibody received from the Drug Controller’s Office, Mumbai
- Evaluation of commercial kits for detection of HIV antibody on receipt of request from the manufacturers

Microbiology and Clinical Pathology
Microbiology:
- Evaluating the essential service package (ESP) for sexually transmitted infections among sex workers in India.
- Quinolone resistance mutations in Neisseria gonorrhea.
- Role of induced sputum as a non-invasive tool for diagnosis of pulmonary infections in HIV positive patients.
- Enteric pathogens in HIV infected individuals with diarrhea.
- Study of virulence determinants of Candida species.
- Isolation, identification and antibiotic sensitivity testing of microorganisms from stool, urine, sputum/oral swabs, and genital swabs specimens collected from patients (study related/referred) attending NARI clinics.
- Mycobacterium tuberculosis testing of sputum/extra pulmonary specimens by ZN smear and culture for evaluation of efficacy of DOTS.
- Serologic testing for syphilis (RPR/ TPHA), Hepatitis B surface antigen, HCV antibody, Cytomegalovirus (IgG/IgM), Toxoplasma (IgG/IgM), HSV-2 (IgG), Cryptococcal antigen for patients (study related/referred) attending NARI clinics.
- Nucleic acid amplification assays for detection of sexually transmitted diseases (Neisseria gonorrhea, Chlamydia trachomatis, Genital ulcer diseases etc).
- Evaluation of commercial kits for HCV antibody detection on request from UNOPS (United Nations Office for Project services).
- External quality assurance programme for syphilis serology for Pathfinder International.
Clinical Pathology:
- Fully automated hematology and biochemistry testing for patients (study related/referred) attending NARI clinics.
- Urine analysis and urine pregnancy testing.
- Cervical cytology screening.
- In-built quality assurance program and College American Pathologists proficiency participation

Behavioural and Social sciences
- Impact of Counseling on Behavior Change (Intra-mural activity)
- Ancillary Social & Behavioral study in Clinical Trials & HIV vaccine trials.
- Care & support studies among HIV infected individual.
- Behavioral prevention & educational studies among adolescents
- Community based studies to understand acceptability, feasibility & concern of clinical trial voluntery.
- Psychometric studies to assess mental health needs of HIV infected individuals.
- Consent comprehension studies (planned).
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